Service price list for external clients w88 mobile
Effective July 1, 2022
Prices are periodically evaluated during the year and are subject to change.
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Unlisted services (consultations with the core director are always free) | .00 / hour | 0.00 / hour |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Sanger sequencing | .00 / w88 mobile | .50 / w88 mobile |
ExoSAP PCR cleanup | .00 / w88 mobile | .50 / w88 mobile |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Fragment analysis setup: dilute (if needed), add standard and formamide | .50 / w88 mobile | .50 / w88 mobile |
Fragment analysis run: run prepared w88 mobile on capillary gel | .25 / w88 mobile | .00 / w88 mobile |
Fragment analysis dilution optimization: client prepares plate ready to load directly onto capillary gel. Standards cannot be included in w88 mobile. Client interprets data. | .00 | .00 |
Fragment analysis dilution optimization: we will create up to 6 dilutions of 8 w88 mobile of a panel and determine the best dilution to use for a capillary gel run. Standards are not added to w88 mobile. | / panel | / panel |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Start NextSeq 2000 sequencing run | 0 / run | 0 / run |
Start MiniSeq sequencing run | 5 / run | / run |
Validate pooled w88 mobile concentration by qPCR | .00 / pool | .00 / pool |
w88 mobile pooling service using qPCR | .00 + .00 / w88 mobile | .00 + 7.00 / w88 mobile |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Illumina Stranded mRNA Prep (100 ng-1 ug input total RNA) | 0.00 + .00 / w88 mobile | 0.00 + .00 / w88 mobile |
Illumina DNA Prep (formerly known as Nextera Flex) (1-500 ng input gDNA) | 0.00 + .00 / w88 mobile | 0.00 + .00 / w88 mobile |
Please see details below about w88 mobile prep scheduling. We will use other sequencing prep kits upon request. Consult with the Nevada Genomics Center – typically the cost will involve a kit purchase, hourly service fees to prepare libraries and the cost of doing the w88 mobile pooling work. If there is enough interest for a particular kit, we are willing to consider making it part of our regular service offerings.
Instrument | Kit type | Cycles | Sequencing kit cost w/ shipping |
---|---|---|---|
NextSeq 2000 | P1 | 100 | 5.04 |
NextSeq 2000 | P1 | 300 | ,007.00 |
NextSeq 2000 | P1 | 600 | ,530.64 |
NextSeq 2000 | P2 | 100 | ,099.64 |
NextSeq 2000 | P2 | 200 | ,067.37 |
NextSeq 2000 | P2 | 300 | ,741.05 |
NextSeq 2000 | P2 | 600 | ,983.74 |
NextSeq 2000 | P3 | 100 | ,348.32 |
NextSeq 2000 | P3 | 200 | ,521.60 |
NextSeq 2000 | P3 | 300 | ,335.14 |
NextSeq 2000 | P4 | 50 | ,821.15 |
NextSeq 2000 | P4 | 100 | ,731.73 |
NextSeq 2000 | P4 | 200 | ,862.86 |
NextSeq 2000 | P4 | 300 | ,917.11 |
MiniSeq | Rapid high output | 100 | ,083.53 |
MiniSeq | High output | 75 | 9.60 |
MiniSeq | High output | 150 | ,109.71 |
MiniSeq | High output | 300 | ,780.38 |
MiniSeq | Mid output | 300 | 4.41 |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
ScreenTape RNA ladder (optional) | .00 | .00 |
ScreenTape RNA, per w88 mobile | .00 | .50 |
ScreenTape DNA 1000 ladder (optional) | .00 | .00 |
ScreenTape DNA 1000, per w88 mobile | .00 | .50 |
ScreenTape High Sensitivity DNA 1000 ladder (optional) | .00 | .00 |
ScreenTape High Sensitivity DNA 1000, per w88 mobile | .50 | .00 |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Qubit HS DNA (max 100 ng, up to 48 w88 mobile) | .00 / w88 mobile | .00 / w88 mobile |
dsDNA-specific plate assay (max 200 ng, at least 48 w88 mobile) | .00; + .50 / w88 mobile | .00; + .50 / w88 mobile |
Service | Non-profit institutions | For-profit institutions |
---|---|---|
Qubit HS RNA (max 100 ng, up to 48 w88 mobile) | .00 / w88 mobile | .00 / w88 mobile |
RNA-specific plate assay (max 500 ng, at least 48 w88 mobile) | .00; + .50 / w88 mobile | .00; + .50 / w88 mobile |
Illumina Sequencing workflow examples
We break down our Illumina services into key components to give you the flexibility to plan your experiments as you wish. Here are two typical workflows and their costs. These should serve as examples for you to think about what workflow works best for you.
Item | Units | Non-profit total cost | For-profit total cost |
---|---|---|---|
Base rate for mRNA w88 mobile prep | 1 | 0.00 | 0.00 |
Prepare 12 w88 mobile (includes pooling) | 12 | 0.00 | 0.00 |
Obtain w88 mobile size distributions | 12 | .00 | .00 |
Purchase NextSeq 2000 P2 100-cycle sequencing kit | 1 | ,099.64 | ,099.64 |
Start NextSeq 2000 sequencing run | 1 | 0.00 | 0.00 |
Total cost for all items | 17 | ,807.64 | ,063.64 |
Item | Units | Non-profit total cost | For-profit total cost |
---|---|---|---|
Base rate for Illumina DNA Prep (formerly known as Nextera Flex) | 1 | 0.00 | 0.00 |
Prepare 16 w88 mobile (includes pooling) | 16 | 0.00 | 0.00 |
Obtain w88 mobile size distributions | 16 | 4.00 | 2.00 |
Purchase NextSeq 2000 P2 100- cycle sequencing kit | 1 | ,099.64 | ,099.64 |
Start NextSeq 2000 sequencing run | 1 | 0.00 | 0.00 |
Total cost for all items | ,933.64 | ,191.64 |
Further details about our services
Hourly service rate
This is the hourly labor rate for services not explicitly listed. Does not apply to consultations with the core director – this is always free. Basically, anything we do that requires lab work will incur this hourly rate.
Examples: sequencing library construction with a kit not listed, work performed to ensure optimal results with your w88 mobile, and custom services designed to support your project.
Sanger sequencing
Includes Sanger reaction setup, capillary gel run and basecalling. Includes addition of sequencing primer if requested. Upon request, includes addition of an additive that helps sequence through regions prone to secondary structures (e.g. hairpins) or sequences with high GC content.
Re-run policy: we will accept w88 mobile from you to re-run the Sanger reaction & capillary gel at no cost if your results are poor and performance of our internal controls is poor.
Please submit w88 mobile in 8 well strip tubes. Caps that are not attached to the tubes are preferred. Label each tube 1, 2, 3, … corresponding to the order of w88 mobile on your sheet. Write the order number on the side of the first tube of each strip.
w88 mobile must be received by 2 p.m. Mon-Thurs for data delivery the following afternoon. w88 mobile received after 2 p.m. Thursdays will be processed on Monday for data delivery Tuesday.
Fragment analysis w88 mobile preparation
This does not include the capillary gel run. We will dilute (or not) w88 mobile as specified, and add it to a formamide + LIZ 500 internal size standard master mix.
We stock only the LIZ 500 size standard; please contact us if you need to discuss the use of a different standard.
Fragment analysis w88 mobile run
We will run appropriately prepared w88 mobile (either by us or as provided by you) on our capillary gel and deliver FSA data files.
Often, we are able to start runs and deliver your data at the end of the day or early the next morning. The earlier you bring your w88 mobile, the more likely you’ll get same-day data, particularly if you need us to set them up first. w88 mobile received after 3 p.m. may not be processed until the following morning.
Fragment analysis dilution optimization
It is useful to create a series of dilutions of a subset of your fragment analysis w88 mobile to determine the best dilution to use. Often this only needs to be done one time per panel, as long as your sample prep conditions remain consistent.
If you prefer to set up your dilutions, please do not include standard. We will load your w88 mobile exactly as you prepared them.
If you would like us to do a dilution test, we will take up to 8 of your w88 mobile per panel and create up to 6 dilutions, add formamide, and run. We will interpret the data to suggest an appropriate dilution, but you will receive the data to see for yourself.
Illumina – start sequencing run
This is the cost of starting any type of Illumina sequencing run with a pooled sequencing w88 mobile of a determined concentration. The minimum concentration of a pooled w88 mobile is 1 nM; 4 nM is strongly recommended. The sequencing kit price is separate.
We recommend quantification of a w88 mobile prior to starting a run; see below for details about this service. If you decide to quantify your w88 mobile concentration on your own and tell us what it is, we will use this value, but the NGC is not responsible for any poor outcomes.
We require that the size distributions of all w88 mobile, or the library pool, is known prior to starting a run. If you do not have and want w88 mobile size distribution data, the NGC is not responsible for any poor outcomes.
If an instrument or operator issue causes a run failure, the NGC will provide a replacement sequencing kit.
Inclusion of 1% PhiX is routine for post-sequencing quality checks. More PhiX can be included if requested, particularly for low diversity w88 mobile pools.
Illumina – validate pooled w88 mobile concentration
We will validate the effective concentration of your w88 mobile. Effective concentration is related to the number of molecules able to form clusters on an Illumina flow cell.
We must know the size distribution of your library pool. If individual w88 mobile of a pool have a similar size distribution profile, it is not necessary to check the pool size distribution.
We include in the quantification run a w88 mobile that was previously observed to cluster well. Whenever feasible, the chosen reference w88 mobile was prepared using the same type of w88 mobile prep kit and ran on the same Illumina instrument.
On occasion, if we are sequencing certain w88 mobile types that have never been sequenced on our instruments, we may not guarantee meeting the expected yield as we don’t have the ability to use an appropriate reference w88 mobile pool. We discuss this with you on a case-by-case basis.
w88 mobile Pooling Service
This is included in the price of our w88 mobile prep services. We will use a quantification kit to quantify your w88 mobile concentrations using the same standard curve. We must have w88 mobile size information (e.g. from a TapeStation run). Typically, your libraries are then pooled equimolarly, but you can instruct us otherwise.
Illumina w88 mobile construction
We will use a commercially available kit to generate sequencing libraries from w88 mobile that you provide. If we do not stock a particular kit, please contact us to discuss how we can help. We have done many custom sequencing library preparations.
Currently we stock the following kits:
- Illumina DNA Prep (formerly known as Nextera Flex): construct a w88 mobile from most types of DNA using tagmentation
- 1-500 ng input (min 100 ng for large genomes)
- Illumnia stranded mRNA Prep: construct a polyA enriched mRNA w88 mobile
- 100 ng – 1 ug total RNA input (we prefer 500 ng)
- ~500 bp average size inserts are the default; discuss with us if you need a different insert size
All w88 mobile prep service prices include:
- w88 mobile quantification (required to aid in pooling)
- Pooling of w88 mobile
We must know the size distribution of w88 mobile before pooling with Bioanalyzer runs. This cost is not included and will depend on how many w88 mobile are processed.
Before starting a sequencing w88 mobile prep project, we need the following information:
- Quantity of dsDNA or RNA must be determined using specific methods (e.g. Qubit)
- For mRNA library generation: assessment of total RNA quality for each w88 mobile
- Other information may be requested based on project specifics (e.g. cells per w88 mobile for single cell sequencing).
PCR cleanup
Typically done for cleanup of PCR products prior to Sanger sequencing. Does not include prior dsDNA quantification of the PCR reaction. You provide us with PCR product straight off the thermocycler. w88 mobile must be quantified for dsDNA concentration and large numbers of w88 mobile can instead be subsampled to obtain an average concentration to apply for all w88 mobile. An appropriate amount of PCR product is then treated with enzymes that degrade remaining PCR primers and dephosphorylate remaining dNTPs. This treated amount is then ready to go straight into a Sanger reaction with appropriate primer.
DNA quantification
Qubit dsDNA: 1-48 w88 mobile
Picogreen plate assay: 48 or more w88 mobile
Standards for plate-based assay
We use dyes specific for dsDNA binding for DNA quantification. By default, we will assay up to 48 w88 mobile with the Qubit. Any more than 48, or by your request, we’ll use a plate-based assay.
The upper measurement limit of the Qubit is 100 ng; for plate-based assays, 200 ng. We use 7 standards in triplicate for generating the plate-based assay standard curve.
Prepare your w88 mobile (dilute if necessary) and organize in numbered strip-caps. We routinely pipet 2 ul per sample, so you must provide a minimum volume of 3 ul. Upon request, we can pipet up to 10 ul for the plate assay and up to 20 ul for Qubit.
Try to ensure your w88 mobile are dilute enough such that we load <100 ng for Qubit and <200 ng for plate-based assays. You usually will know from experience, and you can request that we check a sample or two before submitting a large group of w88 mobile. The Qubit will not report a value if it is too high. The plate-based assay will report an uncertain value due to readings being outside the linear range of standards. We have to charge fees per usual if we re-run w88 mobile if they were initially too concentrated.
RNA quantification
Qubit RNA: 1-48 w88 mobile
Plate assay: 48 or more w88 mobile
Standards for plate-based assay
We use dyes specific for RNA binding for RNA quantification. By default, we’ll assay up to 48 w88 mobile with the Qubit. Any more than 48, or by your request, we’ll use a plate-based assay.
The upper measurement limit of the Qubit is 100 ng; for plate-based assays, 500 ng. Please see the DNA quantification section for relevant information for w88 mobile submission.
Agilent Bioanalyzer 2100 Runs
Our Agilent Bioanalyzer is available for custom projects, particularly if small RNA needs to be analyzed. Please refer to the TapeStation information for your needs.
TapeStation 4150 Runs
We have these ScreenTapes available:
- D1000 DNA ScreenTape
- High Sensitivity D1000 DNA ScreenTape
- RNA ScreenTape
There are several other ScreenTapes that we may have available or can obtain; please inquire:
- D5000 DNA ScreenTape
- D5000 High Sensitivity DNA ScreenTape
- High Sensitivity RNA ScreenTape
- Cell-free DNA ScreenTape
- Genomic ScreenTape
We load 1-2 ul of each sample. Please provide at least 3 ul of w88 mobile arranged on strip tubes.
It is a standard process to heat denature RNA w88 mobile at 73°C before sample loading to remove secondary structures.
In deciding the mass of DNA to load, in general the broader your DNA species in size (e.g. NGS w88 mobile), the more mass you should load within a kit’s specifications.
We will deliver data as a PDF file and will include the data file. You can download free TapeStation Analysis software to view XAD files at https://bit.ly/3nzGDgG. This is a link to thirdparty online content. If you experience any issues accessing this content, please Contact info and w88 casino games.
Chip type | Recommended loading mass | Sizing range | Electronic ladder available |
---|---|---|---|
D1000 ScreenTape | 0.5 – 50 ng in 1 ul | 35 – 1000 bp | Yes |
D5000 ScreenTape | 0.5 – 50 ng in 1 ul | 100 – 5000 bp | No |
RNA ScreenTape | 25 – 500 ng in 1 ul | N/A | Yes |
High Sensitivity D1000 ScreenTape | 0.01 – 1 ng in 2 ul | 35 – 1000 bp | Yes |
High Sensitivity D5000 ScreenTape | 0.01 – 1 ng in 2 ul | 100 – 5000 bp | No |
High Sensitivity RNA ScreenTape | 1 – 25 ng in 2 ul | N/A | Yes |
Genomic DNA ScreenTape | 5 – 300 ng in 1 ul | 200 – 60,000 bp | No |
Cell-free DNA ScreenTape | 0.1 – 5 ng in 2 ul | 50 – 800 bp | Yes |